Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP88Q99567 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NUP88Q99567 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP88Q99567 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.07□□□□□ -1.44
NUP88Q99567 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 RNU6-236P-201ENST00000363886 106 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 RNA5SP455-201ENST00000365190 119 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 SNORA51.8-201ENST00000384234 132 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 MIR525-201ENST00000384978 85 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AF228730.1-201ENST00000397972 663 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 GJA6P-201ENST00000415117 1042 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AL139824.2-201ENST00000458731 1095 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 COX6B1P2-201ENST00000489624 230 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC105233.1-201ENST00000498840 781 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AP000676.2-201ENST00000529711 301 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 NPM1P47-201ENST00000560843 856 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 AC022022.2-201ENST00000602989 360 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AL627230.1-201ENST00000613077 211 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AL591926.8-201ENST00000616876 211 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.06□□□□□ -1.44
NUP88Q99567 AP001784.1-201ENST00000624107 428 ntBASIC6.06□□□□□ -1.44
NUP88Q99567 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.06□□□□□ -1.44
NUP88Q99567 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NUP88Q99567 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
NUP88Q99567 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
NUP88Q99567 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NUP88Q99567 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NUP88Q99567 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 ENSAP3-201ENST00000312710 333 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 RNU6-224P-201ENST00000384055 107 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 NUDT19P3-201ENST00000404698 555 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 TAF13P2-201ENST00000416876 286 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP88Q99567 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NUP88Q99567 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP88Q99567 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP88Q99567 RPS29P10-201ENST00000439197 166 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.05□□□□□ -1.44
NUP88Q99567 RPL34P20-201ENST00000442771 351 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 VN1R25P-201ENST00000443385 738 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
NUP88Q99567 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP88Q99567 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.05□□□□□ -1.44
NUP88Q99567 HIGD1AP8-201ENST00000453927 274 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP88Q99567 AC079168.1-201ENST00000458741 345 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 SNORD11.1-201ENST00000459482 85 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP88Q99567 AP000797.2-201ENST00000475768 606 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 RPL23AP37-201ENST00000479658 549 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 MTND4LP2-201ENST00000502312 285 ntBASIC6.05□□□□□ -1.44
NUP88Q99567 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.05□□□□□ -1.44
NUP88Q99567 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.05□□□□□ -1.44
NUP88Q99567 POLR2KP1-201ENST00000553226 168 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms