Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RN7SL869P-201ENST00000497032 300 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC097460.2-201ENST00000511857 741 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC090572.1-201ENST00000519251 160 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 IGLV10-67-201ENST00000519446 325 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL25P-201ENST00000583862 260 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 BNIP3P22-201ENST00000593399 556 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC022239.4-201ENST00000602626 504 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC010591.1-201ENST00000603941 649 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AL133255.1-201ENST00000606374 441 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MIR6731-201ENST00000614863 72 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC009248.2-201ENST00000619826 254 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 RMST_7.1-201ENST00000621935 268 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AL356585.4-201ENST00000623078 1229 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC016582.3-206ENST00000636547 207 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 ZNF402P-201ENST00000404435 3100 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 AC016583.1-201ENST00000624221 2431 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 ZNF652P1-201ENST00000442420 1309 ntBASIC6.76□□□□□ -1.33
DEPDC4Q8N2C3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC010168.2-201ENST00000562691 5428 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 RPL7P26-201ENST00000333817 754 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 Y_RNA.67-201ENST00000362870 100 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL139327.1-201ENST00000382988 348 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 Y_RNA.474-201ENST00000384341 102 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 DSTNP4-201ENST00000399472 474 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 U3.31-201ENST00000408113 216 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 SETP9-201ENST00000423837 832 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL353729.1-201ENST00000425044 720 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC091390.2-201ENST00000432573 374 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 RPSAP62-201ENST00000432596 833 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL627308.1-201ENST00000435693 821 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC005040.1-201ENST00000437783 482 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL356010.1-201ENST00000456364 102 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 RN7SL834P-201ENST00000461450 286 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 TAAR3P-201ENST00000466706 1078 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 TAAR3P-202ENST00000481759 1025 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC106760.2-201ENST00000504159 619 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC026427.2-201ENST00000506228 536 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 TMEM248P1-201ENST00000510579 951 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC093677.1-201ENST00000514414 678 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 RNU6-327P-201ENST00000516270 127 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC023050.3-201ENST00000541142 333 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 BMS1P15-201ENST00000554269 1141 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AL356432.3-201ENST00000568952 465 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 AC007136.1-201ENST00000589141 199 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 OR7E19P-202ENST00000589942 844 ntBASIC6.75□□□□□ -1.33
DEPDC4Q8N2C3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms