Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFSF4P23510 APOOP2-201ENST00000461561 539 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 MTND1P16-201ENST00000465177 898 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 RN7SL188P-201ENST00000469842 285 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 RPL7P18-201ENST00000478965 734 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 GAPDHP36-201ENST00000480688 918 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
TNFSF4P23510 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFSF4P23510 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFSF4P23510 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 SNORA70.11-201ENST00000515987 138 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 SNORA70.13-201ENST00000516116 138 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 RN7SKP288-201ENST00000516227 268 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 RNA5SP340-201ENST00000517132 107 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC008429.4-201ENST00000521201 182 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AP003461.1-201ENST00000528866 78 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF4P23510 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFSF4P23510 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFSF4P23510 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF4P23510 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC009712.1-201ENST00000564938 316 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC138915.2-201ENST00000569776 97 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFSF4P23510 VN1R82P-201ENST00000601481 356 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFSF4P23510 AL136228.1-201ENST00000622221 319 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC007490.1-201ENST00000624321 703 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AL162377.2-201ENST00000624532 337 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 AC017037.3-201ENST00000625016 472 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFSF4P23510 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFSF4P23510 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TNFSF4P23510 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TNFSF4P23510 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFSF4P23510 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 ERCC6-202ENST00000374127 1782 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 CDR1-202ENST00000625883 1485 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFSF4P23510 MAPK10-304ENST00000641341 3984 ntBASIC5.06□□□□□ -1.6
TNFSF4P23510 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
TNFSF4P23510 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
TNFSF4P23510 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 MTND5P28-201ENST00000438005 1594 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFSF4P23510 SELENOWP1-201ENST00000322792 252 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFSF4P23510 MIR133A2-201ENST00000347538 102 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 Y_RNA.25-201ENST00000362528 102 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 RNU6-621P-201ENST00000364752 109 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 RNY3P9-201ENST00000384727 106 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 RPL23AP17-201ENST00000401064 499 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 NUP35P2-201ENST00000416748 943 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC126120.1-201ENST00000431082 470 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.05□□□□□ -1.6
TNFSF4P23510 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 GEMIN2P1-201ENST00000454246 752 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 SNX5P1-201ENST00000505757 1041 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 OR5H4P-201ENST00000510851 923 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC010587.2-201ENST00000511727 448 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AC097486.1-201ENST00000515331 210 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 DUXAP6-201ENST00000553858 601 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC068446.3-201ENST00000555285 382 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFSF4P23510 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFSF4P23510 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFSF4P23510 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFSF4P23510 AC131235.4-201ENST00000609288 620 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 AC069234.4-201ENST00000621276 412 ntBASIC5.05□□□□□ -1.6
TNFSF4P23510 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TNFSF4P23510 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms