Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 FGF7P2-201ENST00000332473 296 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.813-201ENST00000364639 102 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.311-201ENST00000365068 96 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MIR525-201ENST00000384978 85 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SNORD65.1-201ENST00000390889 71 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC007068.1-201ENST00000396690 844 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 NCSTNP1-201ENST00000406229 144 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 PIGPP2-201ENST00000411569 458 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC013404.1-201ENST00000413068 249 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RPL21P108-201ENST00000413857 481 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RPS7P8-201ENST00000418311 581 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MRPS21P2-201ENST00000424704 264 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 IGLV3-4-201ENST00000432300 244 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MTND1P28-201ENST00000435623 950 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MTND5P20-201ENST00000448677 143 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RPL23AP35-201ENST00000451906 501 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC092001.1-201ENST00000453012 261 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL049634.1-201ENST00000453770 1720 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RFC5P1-201ENST00000454419 874 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL355032.1-201ENST00000472981 438 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RN7SL170P-201ENST00000487098 295 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RPS4XP15-201ENST00000489210 795 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 PSMA2P2-201ENST00000504319 686 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 HSD3BP3-201ENST00000514706 994 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 Y_RNA.702-201ENST00000516843 96 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC011853.1-201ENST00000518911 454 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AP001646.1-201ENST00000527936 915 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR4C2P-201ENST00000530855 1064 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC084121.1-201ENST00000533882 835 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 ZNF519P2-201ENST00000557032 169 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LINC00556-201ENST00000569603 412 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR4K7P-201ENST00000580232 945 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 RNU4ATAC-201ENST00000580972 127 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 MIR548AB-201ENST00000584917 84 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 VN1R92P-201ENST00000598511 928 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC124916.2-201ENST00000604416 224 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC019131.2-201ENST00000609071 870 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC093388.1-201ENST00000609166 430 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL080312.2-201ENST00000613001 630 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AL591926.1-201ENST00000620542 217 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 PABPC1P9-201ENST00000426076 1612 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SEC61A2Q9H9S3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 SNORA72.1-201ENST00000363485 129 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RNU4-91P-201ENST00000364778 135 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 snosnR66.1-201ENST00000391095 99 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 RNA5SP156-201ENST00000410250 110 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 MTCO1P17-201ENST00000411522 491 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 HMGN1P14-201ENST00000412459 517 ntBASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.43□□□□□ -1.54
SEC61A2Q9H9S3 USP9YP6-201ENST00000413550 854 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 414.9 ms