Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
BHLHA9Q7RTU4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
BHLHA9Q7RTU4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BHLHA9Q7RTU4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 Z97832.1-201ENST00000402490 328 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AF274854.1-201ENST00000413236 615 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 MTND4LP21-201ENST00000415303 295 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 COX6B1P1-201ENST00000415962 213 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC112498.1-201ENST00000444401 332 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 HMGN1P5-201ENST00000448591 263 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 SEPT7P3-201ENST00000455017 621 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC245028.2-201ENST00000458673 253 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 CR383656.1-201ENST00000484916 377 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 MTND5P5-201ENST00000503764 376 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 NAMPTP2-201ENST00000505629 1115 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC091860.1-201ENST00000505723 432 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 GAPDHP56-201ENST00000506031 988 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC119751.1-201ENST00000513357 765 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AP003465.2-201ENST00000602571 373 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC008536.1-201ENST00000602872 669 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC020910.3-201ENST00000603701 874 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL355802.4-201ENST00000607635 548 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 FAM25E-202ENST00000608562 189 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC012409.3-201ENST00000611343 981 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 VN1R7P-201ENST00000619242 903 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AL022401.1-201ENST00000619498 108 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
BHLHA9Q7RTU4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 MTCO1P46-201ENST00000451639 1491 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 OR5H2-201ENST00000355273 945 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 RNY3P14-201ENST00000384309 102 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 RNA5SP345-201ENST00000410646 108 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC105402.1-201ENST00000413336 545 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 TBCAP2-201ENST00000416175 326 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC090960.1-201ENST00000421072 306 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC104837.2-201ENST00000427236 424 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 OR52J1P-201ENST00000450596 932 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 RNU6-1334P-201ENST00000516032 105 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 RNA5SP230-201ENST00000517039 122 ntBASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.16□□□□□ -1.58
BHLHA9Q7RTU4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms