Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.82□□□□□ -0.36
PdfS4R2K0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PdfS4R2K0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.81□□□□□ -0.36
PdfS4R2K0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.81□□□□□ -0.36
PdfS4R2K0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.81□□□□□ -0.36
PdfS4R2K0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
PdfS4R2K0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.81□□□□□ -0.36
PdfS4R2K0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
PdfS4R2K0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.8□□□□□ -0.36
PdfS4R2K0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PdfS4R2K0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PdfS4R2K0 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.79□□□□□ -0.36
PdfS4R2K0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.79□□□□□ -0.36
PdfS4R2K0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PdfS4R2K0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms