Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Gm13559-201ENSMUST00000120476 863 ntBASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
H2afb2S4R1M3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
H2afb2S4R1M3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.65■□□□□ 0.26
H2afb2S4R1M3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
H2afb2S4R1M3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
H2afb2S4R1M3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Gm10252-201ENSMUST00000209541 832 ntBASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
H2afb2S4R1M3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
H2afb2S4R1M3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms