Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hdac6Q9Z2V5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.87■□□□□ 0.93
Hdac6Q9Z2V5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Hdac6Q9Z2V5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Gm6089-201ENSMUST00000197666 938 ntBASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 AV026068-213ENSMUST00000223675 1171 ntBASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hdac6Q9Z2V5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Gm43575-201ENSMUST00000196420 516 ntBASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hdac6Q9Z2V5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Gm11780-201ENSMUST00000136880 516 ntBASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Gm6550-201ENSMUST00000187574 993 ntBASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hdac6Q9Z2V5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac6Q9Z2V5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hdac6Q9Z2V5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Gm4459-201ENSMUST00000118750 468 ntBASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Gm12260-201ENSMUST00000122447 411 ntBASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Gm12497-201ENSMUST00000138778 237 ntBASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 Gm6736-201ENSMUST00000166583 948 ntBASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Hdac6Q9Z2V5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms