Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Gm12895-201ENSMUST00000122214 226 ntBASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarcb1Q9Z0H3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarcb1Q9Z0H3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcb1Q9Z0H3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Smarcb1Q9Z0H3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Smarcb1Q9Z0H3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smarcb1Q9Z0H3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Birc2-201ENSMUST00000054878 378 ntBASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smarcb1Q9Z0H3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smarcb1Q9Z0H3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.24■□□□□ 0.35
Smarcb1Q9Z0H3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smarcb1Q9Z0H3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms