Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Gm13186-201ENSMUST00000118031 316 ntBASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Lhx9Q9WUH2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.83■□□□□ 0.13
Lhx9Q9WUH2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Lhx9Q9WUH2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.83■□□□□ 0.13
Lhx9Q9WUH2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lhx9Q9WUH2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Gm27742-201ENSMUST00000184667 60 ntBASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Phf7-203ENSMUST00000226565 1971 ntBASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lhx9Q9WUH2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Gm27357-201ENSMUST00000183754 135 ntBASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lhx9Q9WUH2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lhx9Q9WUH2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms