Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col13a1Q9R1N9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Col13a1Q9R1N9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Col13a1Q9R1N9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col13a1Q9R1N9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col13a1Q9R1N9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col13a1Q9R1N9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms