Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcf1Q9QZM3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcf1Q9QZM3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Gm7213-201ENSMUST00000215977 950 ntBASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcf1Q9QZM3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Gm21559-201ENSMUST00000220638 855 ntBASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Gm8587-201ENSMUST00000076538 843 ntBASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clcf1Q9QZM3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gm6345-202ENSMUST00000180900 204 ntBASIC15.11■□□□□ 0.01
Clcf1Q9QZM3 Gm27389-201ENSMUST00000183622 195 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms