Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gm38027-201ENSMUST00000192315 235 ntBASIC15.03■□□□□ -0
Sec61a2Q9JLR1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sec61a2Q9JLR1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Odf3b-204ENSMUST00000227834 930 ntBASIC15.02■□□□□ -0
Sec61a2Q9JLR1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Sec61a2Q9JLR1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Gm7638-201ENSMUST00000121348 967 ntBASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Gm17661-201ENSMUST00000170317 270 ntBASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Gm30025-201ENSMUST00000218555 728 ntBASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sec61a2Q9JLR1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Gm43799-201ENSMUST00000201845 579 ntBASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Gm9731-201ENSMUST00000209480 747 ntBASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sec61a2Q9JLR1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sec61a2Q9JLR1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms