Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm12527-201ENSMUST00000117967 564 ntBASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rbfox1Q9JJ43 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rbfox1Q9JJ43 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Gm38027-201ENSMUST00000192315 235 ntBASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rbfox1Q9JJ43 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Gm7638-201ENSMUST00000121348 967 ntBASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rbfox1Q9JJ43 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox1Q9JJ43 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Gm10698-201ENSMUST00000182663 604 ntBASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox1Q9JJ43 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms