Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Mir6404-201ENSMUST00000183699 94 ntBASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Gm5264-201ENSMUST00000190584 848 ntBASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Gm6089-201ENSMUST00000197666 938 ntBASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1fQ9JIS7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1fQ9JIS7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cacna1fQ9JIS7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1fQ9JIS7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Gm10175-201ENSMUST00000086013 645 ntBASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Gm11780-201ENSMUST00000136880 516 ntBASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1fQ9JIS7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 AV026068-213ENSMUST00000223675 1171 ntBASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1fQ9JIS7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm5682-201ENSMUST00000173402 505 ntBASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm27628-201ENSMUST00000184911 107 ntBASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cacna1fQ9JIS7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Gm13418-201ENSMUST00000119097 944 ntBASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cacna1fQ9JIS7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms