Protein–RNA interactions for Protein: Q9ESK9

Rb1cc1, RB1-inducible coiled-coil protein 1, mousemouse

Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1cc1Q9ESK9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
Rb1cc1Q9ESK9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Auts2-212ENSMUST00000178555 309 ntBASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Rb1cc1Q9ESK9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rb1cc1Q9ESK9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Gm5953-201ENSMUST00000220644 2616 ntBASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Gm11620-201ENSMUST00000118770 1845 ntBASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rb1cc1Q9ESK9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Gm7063-201ENSMUST00000186840 981 ntBASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Gm5648-201ENSMUST00000122244 1587 ntBASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Gm11764-201ENSMUST00000120221 623 ntBASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC30.28■■■□□ 2.44
Rb1cc1Q9ESK9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rb1cc1Q9ESK9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rb1cc1Q9ESK9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC30.27■■■□□ 2.44
Rb1cc1Q9ESK9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rb1cc1Q9ESK9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
Rb1cc1Q9ESK9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Rb1cc1Q9ESK9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Mir3113-201ENSMUST00000175478 76 ntBASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Mir6404-201ENSMUST00000183699 94 ntBASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rb1cc1Q9ESK9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Chchd1-203ENSMUST00000224633 557 ntBASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Rb1cc1Q9ESK9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 AC159106.1-201ENSMUST00000224421 690 ntBASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Gm8655-201ENSMUST00000221159 852 ntBASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rb1cc1Q9ESK9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
Rb1cc1Q9ESK9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 H2af-ps-201ENSMUST00000119066 295 ntBASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 AC151286.1-201ENSMUST00000198489 145 ntBASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 AC117588.1-201ENSMUST00000228510 999 ntBASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC30.22■■■□□ 2.43
Rb1cc1Q9ESK9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms