Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tubb3Q9ERD7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubb3Q9ERD7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.58■□□□□ 0.25
Tubb3Q9ERD7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tubb3Q9ERD7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Tubb3Q9ERD7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tubb3Q9ERD7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Tubb3Q9ERD7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.54■□□□□ 0.24
Tubb3Q9ERD7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms