Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Gm37722-201ENSMUST00000193757 208 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Phf7-203ENSMUST00000226565 1971 ntBASIC14.42□□□□□ -0.1
Ssmem1Q9D9Y8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Gm11336-201ENSMUST00000118168 334 ntBASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Gm6345-202ENSMUST00000180900 204 ntBASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.41□□□□□ -0.1
Ssmem1Q9D9Y8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssmem1Q9D9Y8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssmem1Q9D9Y8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms