Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Upk3bl1Q9D701 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bl1Q9D701 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bl1Q9D701 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Upk3bl1Q9D701 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Prob1-201ENSMUST00000097619 3021 ntBASIC15.22■□□□□ 0.03
Upk3bl1Q9D701 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Gm19891-201ENSMUST00000189771 303 ntBASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Upk3bl1Q9D701 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Upk3bl1Q9D701 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Upk3bl1Q9D701 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Upk3bl1Q9D701 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms