Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Gm27463-201ENSMUST00000183569 57 ntBASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Phf7-203ENSMUST00000226565 1971 ntBASIC19.5■□□□□ 0.71
Ccdc7Q9D541 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Gm7370-201ENSMUST00000219471 767 ntBASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc7Q9D541 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.48■□□□□ 0.71
Ccdc7Q9D541 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc7Q9D541 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc7Q9D541 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gm11539-201ENSMUST00000119837 557 ntBASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gm44450-201ENSMUST00000199528 114 ntBASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gm18115-201ENSMUST00000221209 621 ntBASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc7Q9D541 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc7Q9D541 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc7Q9D541 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc7Q9D541 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms