Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Gm16061-201ENSMUST00000122167 857 ntBASIC18.28■□□□□ 0.52
Cfap53Q9D439 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.28■□□□□ 0.52
Cfap53Q9D439 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.28■□□□□ 0.52
Cfap53Q9D439 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Mir6982-201ENSMUST00000184354 68 ntBASIC18.28■□□□□ 0.52
Cfap53Q9D439 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cfap53Q9D439 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.27■□□□□ 0.52
Cfap53Q9D439 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Gm13474-201ENSMUST00000122466 815 ntBASIC18.27■□□□□ 0.52
Cfap53Q9D439 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cfap53Q9D439 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cfap53Q9D439 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cfap53Q9D439 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cfap53Q9D439 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Gm13559-201ENSMUST00000120476 863 ntBASIC18.25■□□□□ 0.51
Cfap53Q9D439 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cfap53Q9D439 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cfap53Q9D439 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms