Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Stag1Q9D3E6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Gm13312-201ENSMUST00000119631 718 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Mir8098-201ENSMUST00000184011 137 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Stag1Q9D3E6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Stag1Q9D3E6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Stag1Q9D3E6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm13884-201ENSMUST00000118103 829 ntBASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Rprl3-201ENSMUST00000157400 290 ntBASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm10052-201ENSMUST00000168019 960 ntBASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Gm7729-201ENSMUST00000050143 801 ntBASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.78■□□□□ 0.76
Stag1Q9D3E6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms