Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Vps33aQ9D2N9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vps33aQ9D2N9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vps33aQ9D2N9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vps33aQ9D2N9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps33aQ9D2N9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.71■□□□□ 0.42
Vps33aQ9D2N9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps33aQ9D2N9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vps33aQ9D2N9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Vps33aQ9D2N9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms