Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd1Q9D0E3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd1Q9D0E3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd1Q9D0E3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lysmd1Q9D0E3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Gm6007-201ENSMUST00000208170 823 ntBASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lysmd1Q9D0E3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lysmd1Q9D0E3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lysmd1Q9D0E3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm7774-201ENSMUST00000200064 533 ntBASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm43125-201ENSMUST00000201724 730 ntBASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm9794-201ENSMUST00000202370 423 ntBASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lysmd1Q9D0E3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Mir1938-201ENSMUST00000158746 100 ntBASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Gm4899-201ENSMUST00000178708 719 ntBASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
Lysmd1Q9D0E3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms