Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ssbp3Q9D032 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ssbp3Q9D032 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.9□□□□□ -0.18
Ssbp3Q9D032 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ssbp3Q9D032 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ssbp3Q9D032 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Gm33142-201ENSMUST00000193913 867 ntBASIC13.89□□□□□ -0.19
Ssbp3Q9D032 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ssbp3Q9D032 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gm21362-201ENSMUST00000194272 928 ntBASIC13.88□□□□□ -0.19
Ssbp3Q9D032 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ssbp3Q9D032 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ssbp3Q9D032 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Gm14859-201ENSMUST00000117752 357 ntBASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ssbp3Q9D032 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms