Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ddx47Q9CWX9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ddx47Q9CWX9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ddx47Q9CWX9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Prob1-201ENSMUST00000097619 3021 ntBASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ddx47Q9CWX9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms