Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.63■□□□□ 0.73
Smc3Q9CW03 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc3Q9CW03 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Gm10653-202ENSMUST00000139570 835 ntBASIC19.62■□□□□ 0.73
Smc3Q9CW03 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.62■□□□□ 0.73
Smc3Q9CW03 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc3Q9CW03 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smc3Q9CW03 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.61■□□□□ 0.73
Smc3Q9CW03 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smc3Q9CW03 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Il3ra-202ENSMUST00000223589 738 ntBASIC19.6■□□□□ 0.73
Smc3Q9CW03 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smc3Q9CW03 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc3Q9CW03 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc3Q9CW03 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Mir1199-201ENSMUST00000117015 119 ntBASIC19.58■□□□□ 0.72
Smc3Q9CW03 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.58■□□□□ 0.72
Smc3Q9CW03 Gm18958-201ENSMUST00000174258 762 ntBASIC19.58■□□□□ 0.72
Smc3Q9CW03 Gm29257-201ENSMUST00000186115 639 ntBASIC19.58■□□□□ 0.72
Smc3Q9CW03 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms