Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
RTRAFQ9CQE8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.64□□□□□ -0.23
RTRAFQ9CQE8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.64□□□□□ -0.23
RTRAFQ9CQE8 Reep4-203ENSMUST00000226563 1444 ntBASIC13.64□□□□□ -0.23
RTRAFQ9CQE8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTRAFQ9CQE8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Gm21956-201ENSMUST00000179946 522 ntBASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.63□□□□□ -0.23
RTRAFQ9CQE8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Sybu-209ENSMUST00000228639 4113 ntBASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Gm43017-201ENSMUST00000198296 752 ntBASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RTRAFQ9CQE8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RTRAFQ9CQE8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RTRAFQ9CQE8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms