Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trim11Q99PQ2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim11Q99PQ2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim11Q99PQ2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim11Q99PQ2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim11Q99PQ2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim11Q99PQ2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Trim11Q99PQ2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms