Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.33■□□□□ 0.21
Trim16Q99PP9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim16Q99PP9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.33■□□□□ 0.2
Trim16Q99PP9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim16Q99PP9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim16Q99PP9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.32■□□□□ 0.2
Trim16Q99PP9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.32■□□□□ 0.2
Trim16Q99PP9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Gm5417-201ENSMUST00000079706 384 ntBASIC16.32■□□□□ 0.2
Trim16Q99PP9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim16Q99PP9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim16Q99PP9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.3■□□□□ 0.2
Trim16Q99PP9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.3■□□□□ 0.2
Trim16Q99PP9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim16Q99PP9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim16Q99PP9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms