Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim33Q99PP7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.53■□□□□ 0.24
Trim33Q99PP7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Gm7370-201ENSMUST00000219471 767 ntBASIC16.53■□□□□ 0.24
Trim33Q99PP7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim33Q99PP7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim33Q99PP7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim33Q99PP7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim33Q99PP7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim33Q99PP7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim33Q99PP7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim33Q99PP7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.51■□□□□ 0.23
Trim33Q99PP7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.51■□□□□ 0.23
Trim33Q99PP7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.51■□□□□ 0.23
Trim33Q99PP7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim33Q99PP7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.5■□□□□ 0.23
Trim33Q99PP7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.5■□□□□ 0.23
Trim33Q99PP7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.5■□□□□ 0.23
Trim33Q99PP7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Trim33Q99PP7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms