Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim34aQ99PP6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Gm6376-201ENSMUST00000209407 580 ntBASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim34aQ99PP6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.52■□□□□ 0.88
Trim34aQ99PP6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim34aQ99PP6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Trim34aQ99PP6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim34aQ99PP6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim34aQ99PP6 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim34aQ99PP6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gm6296-201ENSMUST00000222599 943 ntBASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim34aQ99PP6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Gm2651-201ENSMUST00000203560 838 ntBASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim34aQ99PP6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms