Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.48■□□□□ 0.23
Clcc1Q99LI2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Mir3081-201ENSMUST00000175305 84 ntBASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Gm18669-201ENSMUST00000216049 778 ntBASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcc1Q99LI2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcc1Q99LI2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcc1Q99LI2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Clcc1Q99LI2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcc1Q99LI2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcc1Q99LI2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms