Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RtcbQ99LF4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RtcbQ99LF4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.57■□□□□ 0.88
RtcbQ99LF4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Gm14140-201ENSMUST00000119999 995 ntBASIC20.57■□□□□ 0.88
RtcbQ99LF4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
RtcbQ99LF4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm27397-201ENSMUST00000184997 107 ntBASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm6550-201ENSMUST00000187574 993 ntBASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RtcbQ99LF4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.55■□□□□ 0.88
RtcbQ99LF4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Gm24513-201ENSMUST00000174964 138 ntBASIC20.55■□□□□ 0.88
RtcbQ99LF4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.55■□□□□ 0.88
RtcbQ99LF4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Gm6089-201ENSMUST00000197666 938 ntBASIC20.55■□□□□ 0.88
RtcbQ99LF4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.55■□□□□ 0.88
RtcbQ99LF4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.55■□□□□ 0.88
RtcbQ99LF4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RtcbQ99LF4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Gm9727-201ENSMUST00000161387 555 ntBASIC20.54■□□□□ 0.88
RtcbQ99LF4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.54■□□□□ 0.88
RtcbQ99LF4 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.54■□□□□ 0.88
RtcbQ99LF4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RtcbQ99LF4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Gm4995-201ENSMUST00000117247 432 ntBASIC20.53■□□□□ 0.88
RtcbQ99LF4 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.53■□□□□ 0.88
RtcbQ99LF4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RtcbQ99LF4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms