Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.56■□□□□ 0.72
Hps4Q99KG7 Gm13884-201ENSMUST00000118103 829 ntBASIC19.56■□□□□ 0.72
Hps4Q99KG7 Rprl3-201ENSMUST00000157400 290 ntBASIC19.56■□□□□ 0.72
Hps4Q99KG7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Gm44430-201ENSMUST00000203376 995 ntBASIC19.56■□□□□ 0.72
Hps4Q99KG7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.56■□□□□ 0.72
Hps4Q99KG7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hps4Q99KG7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hps4Q99KG7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Gm12644-201ENSMUST00000119935 606 ntBASIC19.54■□□□□ 0.72
Hps4Q99KG7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.54■□□□□ 0.72
Hps4Q99KG7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.54■□□□□ 0.72
Hps4Q99KG7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.54■□□□□ 0.72
Hps4Q99KG7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.53■□□□□ 0.72
Hps4Q99KG7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Gm11452-201ENSMUST00000122376 690 ntBASIC19.53■□□□□ 0.72
Hps4Q99KG7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.53■□□□□ 0.72
Hps4Q99KG7 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.53■□□□□ 0.72
Hps4Q99KG7 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.53■□□□□ 0.72
Hps4Q99KG7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hps4Q99KG7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hps4Q99KG7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hps4Q99KG7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hps4Q99KG7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hps4Q99KG7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hps4Q99KG7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hps4Q99KG7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms