Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.84■□□□□ 0.29
Cdk9Q99J95 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Cdk9Q99J95 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cdk9Q99J95 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Cdk9Q99J95 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cdk9Q99J95 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.82■□□□□ 0.28
Cdk9Q99J95 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.82■□□□□ 0.28
Cdk9Q99J95 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm12441-201ENSMUST00000121806 588 ntBASIC16.82■□□□□ 0.28
Cdk9Q99J95 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm5408-201ENSMUST00000197998 747 ntBASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Gm4968-201ENSMUST00000071458 858 ntBASIC16.82■□□□□ 0.28
Cdk9Q99J95 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdk9Q99J95 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdk9Q99J95 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.8■□□□□ 0.28
Cdk9Q99J95 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms