Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Gm37025-201ENSMUST00000195159 829 ntBASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Gm18025-201ENSMUST00000221733 862 ntBASIC14.9□□□□□ -0.02
Thumpd1Q99J36 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.9□□□□□ -0.02
Thumpd1Q99J36 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Gm13158-201ENSMUST00000122007 736 ntBASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Thumpd1Q99J36 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Gm26571-201ENSMUST00000181399 666 ntBASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Thumpd1Q99J36 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Gm10517-202ENSMUST00000192970 758 ntBASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Thumpd1Q99J36 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms