Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smc1bQ920F6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smc1bQ920F6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smc1bQ920F6 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.18■□□□□ 0.66
Smc1bQ920F6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.17■□□□□ 0.66
Smc1bQ920F6 Gm13884-201ENSMUST00000118103 829 ntBASIC19.17■□□□□ 0.66
Smc1bQ920F6 Olfr129-201ENSMUST00000122318 993 ntBASIC19.17■□□□□ 0.66
Smc1bQ920F6 Gm27459-201ENSMUST00000184860 107 ntBASIC19.17■□□□□ 0.66
Smc1bQ920F6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc1bQ920F6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc1bQ920F6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc1bQ920F6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms