Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdha2Q91Y17 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha2Q91Y17 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha2Q91Y17 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha2Q91Y17 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha2Q91Y17 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.75■□□□□ 0.43
Pcdha2Q91Y17 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha2Q91Y17 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha2Q91Y17 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Gm33142-201ENSMUST00000193913 867 ntBASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha2Q91Y17 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha2Q91Y17 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms