Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Gm27389-201ENSMUST00000183622 195 ntBASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Gm7213-201ENSMUST00000215977 950 ntBASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha3Q91Y16 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdha3Q91Y16 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha3Q91Y16 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.39■□□□□ 0.38
Pcdha3Q91Y16 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha3Q91Y16 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha3Q91Y16 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha3Q91Y16 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms