Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Gm37722-201ENSMUST00000193757 208 ntBASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Gm29707-201ENSMUST00000196325 491 ntBASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Gm18421-201ENSMUST00000204122 625 ntBASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.73■□□□□ 0.43
Pcdha9Q91Y11 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha9Q91Y11 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Gm9013-201ENSMUST00000132939 882 ntBASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Gm6659-201ENSMUST00000174752 547 ntBASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha9Q91Y11 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha9Q91Y11 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha9Q91Y11 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha9Q91Y11 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdha9Q91Y11 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms