Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Phf7-203ENSMUST00000226565 1971 ntBASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Mir6982-201ENSMUST00000184354 68 ntBASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Gm43799-201ENSMUST00000201845 579 ntBASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Gm18115-201ENSMUST00000221209 621 ntBASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb1Q91Y08 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Gm7889-201ENSMUST00000185591 958 ntBASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Gm7213-201ENSMUST00000215977 950 ntBASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb1Q91Y08 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb1Q91Y08 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Gm15565-201ENSMUST00000118890 427 ntBASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Mir5130-201ENSMUST00000175160 84 ntBASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb1Q91Y08 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms