Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Gm28659-201ENSMUST00000188013 759 ntBASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb18Q91Y02 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb18Q91Y02 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhb18Q91Y02 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb18Q91Y02 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb18Q91Y02 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb18Q91Y02 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Gm12895-201ENSMUST00000122214 226 ntBASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb18Q91Y02 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb18Q91Y02 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms