Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb6Q91XZ4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb6Q91XZ4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb6Q91XZ4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhb6Q91XZ4 Gm26039-201ENSMUST00000158152 144 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms