Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.71■□□□□ 0.43
TraipQ8VIG6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TraipQ8VIG6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TraipQ8VIG6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TraipQ8VIG6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TraipQ8VIG6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.69■□□□□ 0.42
TraipQ8VIG6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TraipQ8VIG6 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.68■□□□□ 0.42
TraipQ8VIG6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TraipQ8VIG6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
TraipQ8VIG6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TraipQ8VIG6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TraipQ8VIG6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms