Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.25■□□□□ 0.35
Trim60Q8VI40 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gm10698-201ENSMUST00000182663 604 ntBASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gm38027-201ENSMUST00000192315 235 ntBASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.25■□□□□ 0.35
Trim60Q8VI40 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim60Q8VI40 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Gm12085-201ENSMUST00000119263 940 ntBASIC17.24■□□□□ 0.35
Trim60Q8VI40 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim60Q8VI40 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim60Q8VI40 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.22■□□□□ 0.35
Trim60Q8VI40 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim60Q8VI40 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trim60Q8VI40 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms