Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Gm5408-201ENSMUST00000197998 747 ntBASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40cQ8VHQ4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Rab40cQ8VHQ4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Mtag2-201ENSMUST00000058665 714 ntBASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40cQ8VHQ4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40cQ8VHQ4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab40cQ8VHQ4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms