Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Gm42545-201ENSMUST00000202755 922 ntBASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Gm18959-201ENSMUST00000208954 655 ntBASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vps4aQ8VEJ9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm12382-201ENSMUST00000122005 922 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vps4aQ8VEJ9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps4aQ8VEJ9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Gm14859-201ENSMUST00000117752 357 ntBASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps4aQ8VEJ9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms