Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Idnk-204ENSMUST00000226010 1898 ntBASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lmcd1Q8VEE1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lmcd1Q8VEE1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm7506-201ENSMUST00000207758 815 ntBASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lmcd1Q8VEE1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lmcd1Q8VEE1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lmcd1Q8VEE1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lmcd1Q8VEE1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lmcd1Q8VEE1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lmcd1Q8VEE1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Gm7222-201ENSMUST00000117512 906 ntBASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lmcd1Q8VEE1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms