Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rprd1aQ8VDS4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Gm9013-201ENSMUST00000132939 882 ntBASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Gm25016-201ENSMUST00000158399 131 ntBASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rprd1aQ8VDS4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.14■□□□□ 0.34
Rprd1aQ8VDS4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rprd1aQ8VDS4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm6345-202ENSMUST00000180900 204 ntBASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm5587-201ENSMUST00000206270 674 ntBASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.13■□□□□ 0.33
Rprd1aQ8VDS4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Gm11336-201ENSMUST00000118168 334 ntBASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rprd1aQ8VDS4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms